1．Yuepeng Song, Dong Ci, Min Tian, Deqiang Zhang: Comparison of the physiological effects and transcriptome responses of Populus simonii under different abiotic stresses Plant Mol Biol 2014,86:139-156(SCI, IF=4.07)
2．Yuepeng Song, Qingqing Chen, Dong Ci, Xinning Shao，Deqiang Zhang: Effects of high temperature on photosynthesis and related gene expression in poplar BMC Plant Biology 2014, 14:111(SCI, IF=3.94)
3．Yuepeng Song, Kaifeng Ma, Dong Ci, Zhiyi Zhang, Deqiang Zhang: Biochemical, physiological and gene expression of Populus tomentosa reveals sex-specific differences floral development Physiologia Plantarum 2014,150: 18–31 (SCI, IF=3.26)
4. Yuepeng Song, Zeliang Wang,Wenhao Bo ,Yuanyuan Ren ,Zhiyi Zhang, Deqiang Zhang：Transcriptional profiling by cDNA-AFLP analysis showed differential transcript abundance in response to water stress in Populus hopeiensis BMC Genomics 2012, 13:286 (SCI, IF=4.07)
5. Yuepeng Song, Kaifeng Ma, Dong Ci, Zhiyi Zhang, Deqiang Zhang：Sexual dimorphism floral microRNA profiling and target gene expression in andromonoecious poplar (Populus tomentosa) PLoS One 2013,8(5):e62681 (SCI IF=4.09)
6.Yuepeng Song, Kaifeng Ma, Dong Ci, Qingqing Chen, Jiaxing Tian, Zhiyi Zhang, Deqiang Zhang:Sexual dimorphism floral development in dioecious plants revealed by transcriptome, phytohormone, and DNA methylation analysis in Populus tomentosa Plant Mol Biol 2013,83:559-576 (SCI, IF=4.15)
7. Yuepeng Song, Kaifeng Ma, Wenhao Bo, Zhiyi Zhang, and Deqiang Zhang: Sex-specific DNA methylation and gene expression in andromonoecious poplar. Plant Cell Reports 2012,31(8)1393-1405 (SCI, IF=2.93)
8. Yuepeng Song, Kaifeng Ma, Dong Ci, Xueyuan Tian, Zhiyi Zhang, Deqiang Zhang:The SUPERMAN gene family in Populus: nucleotide diversity and gene expression in a dioecious plant Plant Cell Reports 2013,32(8): 1277-1288 (SCI, IF=2.93)
9. Yuepeng Song, Qingqing Chen, Dong Ci, Deqiang Zhang: Transcriptome profiling reveals differential transcript abundance in response to chilling stress in Populus simonii Plant Cell Reports 2013,32(9): 1407-1425 (SCI, IF=2.93)
10. Yue-peng Song, Xi-bing Jiang, Man Zhang, Ze-liang Wang, Wen-hao Bo, Xin-min An, De-qiang Zhang, Zhi-yi Zhang.Differences of EST-SSR and genomic-SSR markers in assessing genetic diversity in poplar. For. Stud. China, 2012, 14(1): 1–7
11. Xibing Jiang#, Yuepeng Song#, Xiaojun Xi, Bin Guo, Kaifeng Ma, Zeliang Wang, Bo Li, Deqiang Zhang, Xinmin An, Zhiyi Zhang. Physiological and biochemical responses to low temperature stress in hybrid clones of Populus ussuriensis Kom. × P. deltoides Bartr.African Journal of Biotechnology 10(82):19011-19024. (SCI, IF=0.573)( #Co-author)
12. Qingqing Chen#, Yuepeng Song#, Deqiang Zhang.Transcriptome analysis and identification of candidate regulators of the Populus simonii response to heat stress(Revision in Plant Cell Reports) (SCI, IF=2.93)( #Co-author)
13. Kaifeng Ma, Yuepeng Song, Xiaohui Yang, Zhiyi Zhang, Deqiang Zhang: Variation in genomic methylation in natural populations of Chinese white poplar (Minor revision in PLOS ONE ) ( SCI, IF=4.09)
14. Kaifeng Ma, Yuepeng Song, Xibing Jiang, Deqiang Zhang, Zhiyi Zhang, and Bailian Li: Photosynthetic response to genome methylation affects the growth of Chinese white poplar. Tree Genetics and Genomes 2012, 8(6):1407–1421 (SCI, IF=2.42)
15. Kaifeng Ma, Yuepeng Song, Zhen Huang, Liyuan Lin, Zhiyi Zhang, Deqiang Zhang:The low fertility of Chinese white poplar: dynamic changes in anatomical structure, endogenous hormone concentrations,and key gene expression in the reproduction of a naturally occurring hybrid Plant Cell Reports 2013, 32(3): 401–414 (SCI, IF=2.93)
16. Jinhui Chen, Yuepeng Song, He Zhang, Deqiang Zhang: Genome-wide analysis of gene expression in response to drought stress in Populus simonii. Plant Molecular Biology Reports.DOI:10.1007/s11105-013-0563-6 (SCI, IF=2.453)
